ElemeNT version 2023

*
The ElemeNT algorithm will use the supplied GC value (%) as background.

*Sequence: run on reverse strand

Multiple sequences should be provided in FASTA format
(lines starting with ' > ' followed by the sequence name).
The length of each individual sequence is limited to 1000bp.
Recommended sequence length is 200bp.

Search for the following elements: select all
	cutoff		cutoff		cutoff
TATA box		Mammalian Initiator		MTE*
BRE upstream		Drosophila Initiator		DPE*
BRE downstream		BBCABW Initiator		Bridge*
GAGA		Human TCT		Pause button
Ohler Motif 1		Drosophila TCT
		XCPE 1
		XCPE 2

Only elements whose probability is higher than the specified cutoff value will be displayed.
* MTE, DPE and Bridge elements are scored only relative to a detected Initiator and BBCABW motifs

Command line versions of the ElemeNT algorithm are available upon request

Your PWM
Name (optional): cutoff:

A
C
G
T

Custom PWM values:

Please provide a tab-separated PWM values (spaces are supported), according to the indicated nucleotide order.
Since consensus sequence of your PWM is not available, consensus score will appear as "NA".